Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDKL1Q00532 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDKL1Q00532 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL1Q00532 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKL1Q00532 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKL1Q00532 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKL1Q00532 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKL1Q00532 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.71■□□□□ 0.43
CDKL1Q00532 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDKL1Q00532 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 AL137013.1-201ENST00000432946 1228 ntBASIC17.71■□□□□ 0.43
CDKL1Q00532 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 DUTP2-201ENST00000519164 463 ntBASIC17.71■□□□□ 0.43
CDKL1Q00532 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.71■□□□□ 0.43
CDKL1Q00532 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.71■□□□□ 0.43
CDKL1Q00532 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.71■□□□□ 0.43
CDKL1Q00532 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.71■□□□□ 0.43
CDKL1Q00532 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.71■□□□□ 0.43
CDKL1Q00532 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDKL1Q00532 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDKL1Q00532 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDKL1Q00532 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.71■□□□□ 0.42
CDKL1Q00532 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDKL1Q00532 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.71■□□□□ 0.42
CDKL1Q00532 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDKL1Q00532 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDKL1Q00532 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.71■□□□□ 0.42
CDKL1Q00532 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 KRT89P-201ENST00000620027 1478 ntBASIC17.7■□□□□ 0.42
CDKL1Q00532 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.7■□□□□ 0.42
CDKL1Q00532 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 RASA4DP-201ENST00000460726 1199 ntBASIC17.7■□□□□ 0.42
CDKL1Q00532 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 AC113404.2-201ENST00000507884 177 ntBASIC17.7■□□□□ 0.42
CDKL1Q00532 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.7■□□□□ 0.42
CDKL1Q00532 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.7■□□□□ 0.42
CDKL1Q00532 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDKL1Q00532 AC012317.2-201ENST00000623305 2251 ntBASIC17.7■□□□□ 0.42
CDKL1Q00532 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDKL1Q00532 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDKL1Q00532 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDKL1Q00532 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL1Q00532 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL1Q00532 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL1Q00532 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL1Q00532 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms