Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2BQ00403 AC097374.2-201ENST00000618617 1306 ntBASIC19.64■□□□□ 0.73
GTF2BQ00403 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF2BQ00403 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
GTF2BQ00403 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF2BQ00403 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2BQ00403 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.64■□□□□ 0.73
GTF2BQ00403 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.63■□□□□ 0.73
GTF2BQ00403 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
GTF2BQ00403 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 AC125634.1-201ENST00000438758 1403 ntBASIC19.63■□□□□ 0.73
GTF2BQ00403 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 AC096633.1-201ENST00000422446 749 ntBASIC19.63■□□□□ 0.73
GTF2BQ00403 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GTF2BQ00403 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.63■□□□□ 0.73
GTF2BQ00403 AL138831.2-201ENST00000606564 490 ntBASIC19.63■□□□□ 0.73
GTF2BQ00403 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2BQ00403 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.63■□□□□ 0.73
GTF2BQ00403 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2BQ00403 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GTF2BQ00403 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2BQ00403 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 IGHV3-47-201ENST00000425060 335 ntBASIC19.62■□□□□ 0.73
GTF2BQ00403 LINC00265-3P-201ENST00000447588 903 ntBASIC19.62■□□□□ 0.73
GTF2BQ00403 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.62■□□□□ 0.73
GTF2BQ00403 VENTXP7-201ENST00000475503 772 ntBASIC19.62■□□□□ 0.73
GTF2BQ00403 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2BQ00403 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2BQ00403 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.62■□□□□ 0.73
GTF2BQ00403 Z69720.1-201ENST00000601483 472 ntBASIC19.62■□□□□ 0.73
GTF2BQ00403 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GTF2BQ00403 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2BQ00403 AC006116.8-202ENST00000587620 1550 ntBASIC19.61■□□□□ 0.73
GTF2BQ00403 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GTF2BQ00403 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.61■□□□□ 0.73
GTF2BQ00403 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF2BQ00403 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GTF2BQ00403 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 AC116407.2-201ENST00000613639 860 ntBASIC19.61■□□□□ 0.73
GTF2BQ00403 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2BQ00403 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GTF2BQ00403 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2BQ00403 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2BQ00403 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GTF2BQ00403 AC009949.1-201ENST00000623048 1830 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms