Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 TREML5P-201ENST00000421694 576 ntBASIC11.06□□□□□ -0.64
HSPG2P98160 AL020989.1-201ENST00000422979 469 ntBASIC11.06□□□□□ -0.64
HSPG2P98160 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.06□□□□□ -0.64
HSPG2P98160 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 PALM-208ENST00000592155 2272 ntTSL 4 BASIC11.05□□□□□ -0.64
HSPG2P98160 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.05□□□□□ -0.64
HSPG2P98160 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 AC023141.13-201ENST00000604991 943 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
HSPG2P98160 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 AC107890.1-201ENST00000422478 521 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 AC069335.1-201ENST00000489972 472 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.05□□□□□ -0.64
HSPG2P98160 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 IGHV3-72-202ENST00000621503 303 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 SIRPAP1-201ENST00000448467 1770 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 RPS15P9-201ENST00000494093 319 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.05□□□□□ -0.64
HSPG2P98160 AC008687.5-201ENST00000593746 558 ntBASIC11.05□□□□□ -0.64
HSPG2P98160 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HSPG2P98160 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
HSPG2P98160 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.05□□□□□ -0.64
HSPG2P98160 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.05□□□□□ -0.64
HSPG2P98160 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HSPG2P98160 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.04□□□□□ -0.64
HSPG2P98160 AL499627.1-201ENST00000569373 2188 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 CNN2P2-201ENST00000443536 909 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 CNN2P3-201ENST00000450201 906 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 TIMM8BP1-201ENST00000452384 211 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 GPR53P-205ENST00000457298 1084 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 MIR4525-201ENST00000580000 75 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 AL353135.1-201ENST00000606729 504 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 AL136317.3-201ENST00000618497 906 ntBASIC11.04□□□□□ -0.64
HSPG2P98160 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.04□□□□□ -0.64
HSPG2P98160 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HSPG2P98160 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
HSPG2P98160 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC11.04□□□□□ -0.64
HSPG2P98160 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HSPG2P98160 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.04□□□□□ -0.64
HSPG2P98160 AC004890.2-204ENST00000481968 304 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms