Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCNA1P78396 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
CCNA1P78396 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNA1P78396 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.4■□□□□ 0.86
CCNA1P78396 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.4■□□□□ 0.86
CCNA1P78396 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.4■□□□□ 0.86
CCNA1P78396 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.4■□□□□ 0.86
CCNA1P78396 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCNA1P78396 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 MTDHP5-201ENST00000598980 586 ntBASIC20.4■□□□□ 0.86
CCNA1P78396 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.4■□□□□ 0.86
CCNA1P78396 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCNA1P78396 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.39■□□□□ 0.86
CCNA1P78396 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCNA1P78396 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCNA1P78396 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCNA1P78396 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCNA1P78396 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CCNA1P78396 AC022898.2-201ENST00000616822 1312 ntBASIC20.39■□□□□ 0.85
CCNA1P78396 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCNA1P78396 SPDYE21P-201ENST00000413323 827 ntBASIC20.39■□□□□ 0.85
CCNA1P78396 RPS8P6-201ENST00000426177 609 ntBASIC20.39■□□□□ 0.85
CCNA1P78396 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.39■□□□□ 0.85
CCNA1P78396 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.39■□□□□ 0.85
CCNA1P78396 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.39■□□□□ 0.85
CCNA1P78396 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.39■□□□□ 0.85
CCNA1P78396 AC136632.2-201ENST00000512891 861 ntBASIC20.39■□□□□ 0.85
CCNA1P78396 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
CCNA1P78396 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.39■□□□□ 0.85
CCNA1P78396 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.39■□□□□ 0.85
CCNA1P78396 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 ESPNP-201ENST00000270691 2015 ntBASIC20.39■□□□□ 0.85
CCNA1P78396 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCNA1P78396 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCNA1P78396 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CCNA1P78396 AC010460.3-201ENST00000511359 1579 ntBASIC20.38■□□□□ 0.85
CCNA1P78396 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.38■□□□□ 0.85
CCNA1P78396 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCNA1P78396 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.38■□□□□ 0.85
CCNA1P78396 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CCNA1P78396 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCNA1P78396 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCNA1P78396 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CCNA1P78396 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCNA1P78396 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.37■□□□□ 0.85
CCNA1P78396 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCNA1P78396 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.37■□□□□ 0.85
CCNA1P78396 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCNA1P78396 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.37■□□□□ 0.85
CCNA1P78396 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNA1P78396 AC073621.1-201ENST00000392730 636 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms