Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 GPAT2P1-201ENST00000444924 1672 ntBASIC16.49■□□□□ 0.23
CDC42P60953 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDC42P60953 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDC42P60953 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.49■□□□□ 0.23
CDC42P60953 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
CDC42P60953 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC42P60953 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.48■□□□□ 0.23
CDC42P60953 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDC42P60953 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CDC42P60953 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CDC42P60953 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDC42P60953 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDC42P60953 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 AC104771.1-201ENST00000603335 964 ntBASIC16.48■□□□□ 0.23
CDC42P60953 AC110285.5-201ENST00000611501 352 ntBASIC16.48■□□□□ 0.23
CDC42P60953 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 AC130371.2-201ENST00000619443 611 ntBASIC16.48■□□□□ 0.23
CDC42P60953 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 AC133963.1-201ENST00000504166 1679 ntBASIC16.48■□□□□ 0.23
CDC42P60953 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.48■□□□□ 0.23
CDC42P60953 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDC42P60953 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDC42P60953 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 TNRC18P3-201ENST00000441896 2691 ntBASIC16.48■□□□□ 0.23
CDC42P60953 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDC42P60953 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
CDC42P60953 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDC42P60953 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDC42P60953 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC42P60953 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.47■□□□□ 0.23
CDC42P60953 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.47■□□□□ 0.23
CDC42P60953 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CDC42P60953 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CDC42P60953 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC42P60953 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDC42P60953 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDC42P60953 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC42P60953 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDC42P60953 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CDC42P60953 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms