Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 AC233702.3-201ENST00000578656 1387 ntBASIC20.58■□□□□ 0.88
CHMP4BP1P59074 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP4BP1P59074 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 AC068587.9-201ENST00000641814 219 ntBASIC20.57■□□□□ 0.88
CHMP4BP1P59074 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMP4BP1P59074 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 IGHGP-201ENST00000390555 1178 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 KRT17P6-201ENST00000453795 1220 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 GUSBP12-201ENST00000513727 720 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 Z69720.1-201ENST00000601483 472 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 AL592071.1-201ENST00000611956 408 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.56■□□□□ 0.88
CHMP4BP1P59074 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP4BP1P59074 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP4BP1P59074 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP4BP1P59074 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms