Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.2■□□□□ 0.98
RHBDL3P58872 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RHBDL3P58872 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RHBDL3P58872 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RHBDL3P58872 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDL3P58872 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.19■□□□□ 0.98
RHBDL3P58872 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.19■□□□□ 0.98
RHBDL3P58872 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 KRT18P58-201ENST00000527480 1120 ntBASIC21.19■□□□□ 0.98
RHBDL3P58872 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.19■□□□□ 0.98
RHBDL3P58872 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.19■□□□□ 0.98
RHBDL3P58872 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.19■□□□□ 0.98
RHBDL3P58872 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 AC006538.3-201ENST00000612495 578 ntBASIC21.19■□□□□ 0.98
RHBDL3P58872 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 AC008735.5-201ENST00000623544 497 ntBASIC21.19■□□□□ 0.98
RHBDL3P58872 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDL3P58872 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.19■□□□□ 0.98
RHBDL3P58872 AC004817.3-201ENST00000602957 2129 ntBASIC21.19■□□□□ 0.98
RHBDL3P58872 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
RHBDL3P58872 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.18■□□□□ 0.98
RHBDL3P58872 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
RHBDL3P58872 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RHBDL3P58872 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RHBDL3P58872 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.18■□□□□ 0.98
RHBDL3P58872 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RHBDL3P58872 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.18■□□□□ 0.98
RHBDL3P58872 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RHBDL3P58872 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RHBDL3P58872 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
RHBDL3P58872 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.18■□□□□ 0.98
RHBDL3P58872 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 HLA-J-201ENST00000462773 1622 ntBASIC21.18■□□□□ 0.98
RHBDL3P58872 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDL3P58872 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.17■□□□□ 0.98
RHBDL3P58872 AC098831.1-202ENST00000438821 336 ntBASIC21.17■□□□□ 0.98
RHBDL3P58872 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 POLD2P1-201ENST00000511220 997 ntBASIC21.17■□□□□ 0.98
RHBDL3P58872 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.17■□□□□ 0.98
RHBDL3P58872 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.17■□□□□ 0.98
RHBDL3P58872 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.17■□□□□ 0.98
RHBDL3P58872 SIGLEC16-201ENST00000599858 1437 ntBASIC21.17■□□□□ 0.98
RHBDL3P58872 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.17■□□□□ 0.98
RHBDL3P58872 AL049757.1-201ENST00000616842 1596 ntBASIC21.17■□□□□ 0.98
RHBDL3P58872 SIRPAP1-201ENST00000448467 1770 ntBASIC21.17■□□□□ 0.98
RHBDL3P58872 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDL3P58872 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDL3P58872 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHBDL3P58872 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHBDL3P58872 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms