Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.41□□□□□ -0.26
CMC4P56277 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.4□□□□□ -0.26
CMC4P56277 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.4□□□□□ -0.26
CMC4P56277 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 LINC00167-201ENST00000530583 1419 ntBASIC13.4□□□□□ -0.26
CMC4P56277 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CMC4P56277 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CMC4P56277 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 ATP5G2P1-201ENST00000433580 426 ntBASIC13.4□□□□□ -0.26
CMC4P56277 SLC25A6P5-201ENST00000435663 894 ntBASIC13.4□□□□□ -0.26
CMC4P56277 DRAXINP1-201ENST00000437611 948 ntBASIC13.4□□□□□ -0.26
CMC4P56277 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 RN7SL606P-201ENST00000472779 293 ntBASIC13.4□□□□□ -0.26
CMC4P56277 AC068472.1-201ENST00000474589 881 ntBASIC13.4□□□□□ -0.26
CMC4P56277 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.4□□□□□ -0.26
CMC4P56277 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.4□□□□□ -0.26
CMC4P56277 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.4□□□□□ -0.26
CMC4P56277 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CMC4P56277 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CMC4P56277 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CMC4P56277 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.4□□□□□ -0.27
CMC4P56277 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
CMC4P56277 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.39□□□□□ -0.27
CMC4P56277 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 ABALON-201ENST00000629058 1903 ntBASIC13.39□□□□□ -0.27
CMC4P56277 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CMC4P56277 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.39□□□□□ -0.27
CMC4P56277 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.39□□□□□ -0.27
CMC4P56277 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.39□□□□□ -0.27
CMC4P56277 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 AC112698.1-201ENST00000510299 916 ntBASIC13.39□□□□□ -0.27
CMC4P56277 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.39□□□□□ -0.27
CMC4P56277 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.39□□□□□ -0.27
CMC4P56277 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 AC092329.2-201ENST00000598402 547 ntBASIC13.39□□□□□ -0.27
CMC4P56277 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 AL592071.1-201ENST00000611956 408 ntBASIC13.39□□□□□ -0.27
CMC4P56277 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.39□□□□□ -0.27
CMC4P56277 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CMC4P56277 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CMC4P56277 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.39□□□□□ -0.27
CMC4P56277 AC097374.2-201ENST00000618617 1306 ntBASIC13.39□□□□□ -0.27
CMC4P56277 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CMC4P56277 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.38□□□□□ -0.27
CMC4P56277 AL096828.2-201ENST00000567259 1965 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms