Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SUMO3P55854 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SUMO3P55854 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SUMO3P55854 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
SUMO3P55854 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 AC246785.2-201ENST00000432512 513 ntBASIC16.3■□□□□ 0.2
SUMO3P55854 DDX43P3-201ENST00000441064 443 ntBASIC16.3■□□□□ 0.2
SUMO3P55854 AL353801.3-201ENST00000609898 542 ntBASIC16.3■□□□□ 0.2
SUMO3P55854 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
SUMO3P55854 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.3■□□□□ 0.2
SUMO3P55854 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 AL358472.4-201ENST00000633140 710 ntBASIC16.3■□□□□ 0.2
SUMO3P55854 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SUMO3P55854 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.3■□□□□ 0.2
SUMO3P55854 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SUMO3P55854 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SUMO3P55854 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.29■□□□□ 0.2
SUMO3P55854 TSSC2-201ENST00000450217 709 ntBASIC16.29■□□□□ 0.2
SUMO3P55854 VENTXP7-201ENST00000475503 772 ntBASIC16.29■□□□□ 0.2
SUMO3P55854 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SUMO3P55854 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.29■□□□□ 0.2
SUMO3P55854 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SUMO3P55854 NOC2LP2-201ENST00000407594 1944 ntBASIC16.29■□□□□ 0.2
SUMO3P55854 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.29■□□□□ 0.2
SUMO3P55854 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 KRT8P47-201ENST00000604727 1398 ntBASIC16.28■□□□□ 0.2
SUMO3P55854 AC016734.2-201ENST00000624325 1377 ntBASIC16.28■□□□□ 0.2
SUMO3P55854 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SUMO3P55854 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.28■□□□□ 0.2
SUMO3P55854 AC069148.1-201ENST00000608741 768 ntBASIC16.28■□□□□ 0.2
SUMO3P55854 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 AC124864.1-201ENST00000623408 392 ntBASIC16.28■□□□□ 0.2
SUMO3P55854 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SUMO3P55854 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SUMO3P55854 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.28■□□□□ 0.2
SUMO3P55854 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.27■□□□□ 0.2
SUMO3P55854 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SUMO3P55854 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SUMO3P55854 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SUMO3P55854 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SUMO3P55854 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms