Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDH6P55285 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH6P55285 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH6P55285 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH6P55285 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH6P55285 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
CDH6P55285 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH6P55285 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH6P55285 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 AK4P3-201ENST00000418260 669 ntBASIC18.74■□□□□ 0.59
CDH6P55285 HLA-F-220ENST00000434407 884 ntBASIC18.74■□□□□ 0.59
CDH6P55285 AC092597.1-201ENST00000487352 616 ntBASIC18.74■□□□□ 0.59
CDH6P55285 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 AC113404.2-201ENST00000507884 177 ntBASIC18.74■□□□□ 0.59
CDH6P55285 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH6P55285 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH6P55285 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH6P55285 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CDH6P55285 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 KRT89P-201ENST00000620027 1478 ntBASIC18.73■□□□□ 0.59
CDH6P55285 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 TMPOP1-202ENST00000424642 1267 ntBASIC18.73■□□□□ 0.59
CDH6P55285 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 KRT18P38-201ENST00000449496 1282 ntBASIC18.73■□□□□ 0.59
CDH6P55285 HOMER2P1-201ENST00000455653 964 ntBASIC18.73■□□□□ 0.59
CDH6P55285 AL359075.1-203ENST00000462729 1002 ntBASIC18.73■□□□□ 0.59
CDH6P55285 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH6P55285 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH6P55285 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH6P55285 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH6P55285 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CDH6P55285 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDH6P55285 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDH6P55285 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH6P55285 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CDH6P55285 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH6P55285 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH6P55285 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH6P55285 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH6P55285 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 AC100803.2-201ENST00000562459 1963 ntBASIC18.72■□□□□ 0.59
CDH6P55285 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH6P55285 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms