Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFBP49765 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.54■□□□□ 0.88
VEGFBP49765 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.54■□□□□ 0.88
VEGFBP49765 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.53■□□□□ 0.88
VEGFBP49765 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFBP49765 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFBP49765 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.53■□□□□ 0.88
VEGFBP49765 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VEGFBP49765 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
VEGFBP49765 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.53■□□□□ 0.88
VEGFBP49765 GPR53P-205ENST00000457298 1084 ntBASIC20.53■□□□□ 0.88
VEGFBP49765 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.53■□□□□ 0.88
VEGFBP49765 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.53■□□□□ 0.88
VEGFBP49765 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.53■□□□□ 0.88
VEGFBP49765 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.53■□□□□ 0.88
VEGFBP49765 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.53■□□□□ 0.88
VEGFBP49765 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VEGFBP49765 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFBP49765 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFBP49765 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.52■□□□□ 0.88
VEGFBP49765 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
VEGFBP49765 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.52■□□□□ 0.88
VEGFBP49765 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.52■□□□□ 0.88
VEGFBP49765 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.52■□□□□ 0.88
VEGFBP49765 KRT18P32-201ENST00000424695 1287 ntBASIC20.52■□□□□ 0.88
VEGFBP49765 AL671277.1-201ENST00000429656 993 ntBASIC20.52■□□□□ 0.88
VEGFBP49765 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.52■□□□□ 0.88
VEGFBP49765 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.52■□□□□ 0.88
VEGFBP49765 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.52■□□□□ 0.88
VEGFBP49765 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFBP49765 AC132938.5-201ENST00000624980 1813 ntBASIC20.52■□□□□ 0.88
VEGFBP49765 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.52■□□□□ 0.88
VEGFBP49765 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.52■□□□□ 0.88
VEGFBP49765 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.52■□□□□ 0.87
VEGFBP49765 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VEGFBP49765 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
VEGFBP49765 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.51■□□□□ 0.87
VEGFBP49765 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 AL355306.1-201ENST00000415580 579 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 GPS2P2-201ENST00000430745 888 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 SPDYE11-202ENST00000450699 704 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 SPDYE9P-201ENST00000570642 692 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.51■□□□□ 0.87
VEGFBP49765 SPDYE10P-202ENST00000612005 668 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 SPDYE8P-202ENST00000612377 668 ntBASIC20.51■□□□□ 0.87
VEGFBP49765 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.51■□□□□ 0.87
VEGFBP49765 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
VEGFBP49765 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VEGFBP49765 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.5■□□□□ 0.87
VEGFBP49765 AL353593.2-201ENST00000602529 1483 ntBASIC20.5■□□□□ 0.87
VEGFBP49765 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.5■□□□□ 0.87
VEGFBP49765 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.5■□□□□ 0.87
VEGFBP49765 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.5■□□□□ 0.87
VEGFBP49765 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
VEGFBP49765 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VEGFBP49765 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.5■□□□□ 0.87
VEGFBP49765 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.5■□□□□ 0.87
VEGFBP49765 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.5■□□□□ 0.87
VEGFBP49765 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms