Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.19■□□□□ 0.82
CENPFP49454 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.19■□□□□ 0.82
CENPFP49454 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.19■□□□□ 0.82
CENPFP49454 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CENPFP49454 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.19■□□□□ 0.82
CENPFP49454 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CENPFP49454 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CENPFP49454 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CENPFP49454 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.19■□□□□ 0.82
CENPFP49454 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.19■□□□□ 0.82
CENPFP49454 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CENPFP49454 AC006557.2-201ENST00000592985 1240 ntBASIC20.19■□□□□ 0.82
CENPFP49454 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CENPFP49454 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CENPFP49454 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CENPFP49454 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
CENPFP49454 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 IGLL3P-201ENST00000412472 434 ntBASIC20.18■□□□□ 0.82
CENPFP49454 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.18■□□□□ 0.82
CENPFP49454 AC015911.4-201ENST00000588022 1070 ntBASIC20.18■□□□□ 0.82
CENPFP49454 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 ADH5P3-201ENST00000433842 1137 ntBASIC20.18■□□□□ 0.82
CENPFP49454 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CENPFP49454 AC112698.1-201ENST00000510299 916 ntBASIC20.18■□□□□ 0.82
CENPFP49454 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.18■□□□□ 0.82
CENPFP49454 AC022145.2-201ENST00000598203 171 ntBASIC20.18■□□□□ 0.82
CENPFP49454 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CENPFP49454 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
CENPFP49454 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.18■□□□□ 0.82
CENPFP49454 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CENPFP49454 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CENPFP49454 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.18■□□□□ 0.82
CENPFP49454 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CENPFP49454 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CENPFP49454 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CENPFP49454 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.17■□□□□ 0.82
CENPFP49454 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CENPFP49454 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.17■□□□□ 0.82
CENPFP49454 AC093214.1-201ENST00000511688 1107 ntBASIC20.17■□□□□ 0.82
CENPFP49454 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.17■□□□□ 0.82
CENPFP49454 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 LINC01126-201ENST00000623515 1646 ntBASIC20.17■□□□□ 0.82
CENPFP49454 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CENPFP49454 MTCL1P1-201ENST00000446207 792 ntBASIC20.17■□□□□ 0.82
CENPFP49454 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.17■□□□□ 0.82
CENPFP49454 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.17■□□□□ 0.82
CENPFP49454 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CENPFP49454 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CENPFP49454 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.16■□□□□ 0.82
CENPFP49454 MRPL20P1-201ENST00000400819 433 ntBASIC20.16■□□□□ 0.82
CENPFP49454 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.16■□□□□ 0.82
CENPFP49454 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.16■□□□□ 0.82
CENPFP49454 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CENPFP49454 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.16■□□□□ 0.82
CENPFP49454 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CENPFP49454 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 AF228730.6-201ENST00000641497 218 ntBASIC20.15■□□□□ 0.82
CENPFP49454 AC084121.3-201ENST00000641716 218 ntBASIC20.15■□□□□ 0.82
CENPFP49454 AC105233.6-201ENST00000642093 218 ntBASIC20.15■□□□□ 0.82
CENPFP49454 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CENPFP49454 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.15■□□□□ 0.82
CENPFP49454 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.15■□□□□ 0.82
CENPFP49454 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.15■□□□□ 0.82
CENPFP49454 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.15■□□□□ 0.82
CENPFP49454 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms