Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD4P46934 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.19■□□□□ 0.98
NEDD4P46934 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.19■□□□□ 0.98
NEDD4P46934 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD4P46934 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NEDD4P46934 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 AC246785.2-201ENST00000432512 513 ntBASIC21.18■□□□□ 0.98
NEDD4P46934 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.18■□□□□ 0.98
NEDD4P46934 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD4P46934 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
NEDD4P46934 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD4P46934 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NEDD4P46934 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD4P46934 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NEDD4P46934 AC012313.10-201ENST00000623509 926 ntBASIC21.18■□□□□ 0.98
NEDD4P46934 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.18■□□□□ 0.98
NEDD4P46934 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD4P46934 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD4P46934 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.18■□□□□ 0.98
NEDD4P46934 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.17■□□□□ 0.98
NEDD4P46934 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
NEDD4P46934 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.17■□□□□ 0.98
NEDD4P46934 AC011840.4-201ENST00000578471 627 ntBASIC21.17■□□□□ 0.98
NEDD4P46934 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.17■□□□□ 0.98
NEDD4P46934 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.17■□□□□ 0.98
NEDD4P46934 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.17■□□□□ 0.98
NEDD4P46934 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD4P46934 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NEDD4P46934 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.16■□□□□ 0.98
NEDD4P46934 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 IGHV3-47-201ENST00000425060 335 ntBASIC21.16■□□□□ 0.98
NEDD4P46934 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.16■□□□□ 0.98
NEDD4P46934 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 AC074051.2-201ENST00000565115 352 ntBASIC21.16■□□□□ 0.98
NEDD4P46934 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.16■□□□□ 0.98
NEDD4P46934 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.16■□□□□ 0.98
NEDD4P46934 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEDD4P46934 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NEDD4P46934 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.15■□□□□ 0.98
NEDD4P46934 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NEDD4P46934 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NEDD4P46934 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 KRT17P6-201ENST00000453795 1220 ntBASIC21.15■□□□□ 0.98
NEDD4P46934 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.15■□□□□ 0.98
NEDD4P46934 KRT18P56-201ENST00000507275 550 ntBASIC21.15■□□□□ 0.98
NEDD4P46934 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.15■□□□□ 0.98
NEDD4P46934 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.15■□□□□ 0.98
NEDD4P46934 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.15■□□□□ 0.98
NEDD4P46934 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
NEDD4P46934 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.15■□□□□ 0.98
NEDD4P46934 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NEDD4P46934 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.15■□□□□ 0.98
NEDD4P46934 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEDD4P46934 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEDD4P46934 NSUN5P1-202ENST00000421140 1535 ntBASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms