Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.8■□□□□ 0.6
MTHFRP42898 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 LINC00602-201ENST00000629776 2065 ntBASIC18.8■□□□□ 0.6
MTHFRP42898 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTHFRP42898 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
MTHFRP42898 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MTHFRP42898 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.79■□□□□ 0.6
MTHFRP42898 MTDHP5-201ENST00000598980 586 ntBASIC18.79■□□□□ 0.6
MTHFRP42898 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTHFRP42898 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MTHFRP42898 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTHFRP42898 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.78■□□□□ 0.6
MTHFRP42898 AP002414.3-201ENST00000589352 1468 ntBASIC18.78■□□□□ 0.6
MTHFRP42898 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 MYLKP1-201ENST00000509077 1580 ntBASIC18.78■□□□□ 0.6
MTHFRP42898 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MTHFRP42898 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MTHFRP42898 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 AC007967.2-201ENST00000432613 625 ntBASIC18.78■□□□□ 0.6
MTHFRP42898 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
MTHFRP42898 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.78■□□□□ 0.6
MTHFRP42898 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.78■□□□□ 0.6
MTHFRP42898 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.78■□□□□ 0.6
MTHFRP42898 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTHFRP42898 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MTHFRP42898 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.77■□□□□ 0.6
MTHFRP42898 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.77■□□□□ 0.6
MTHFRP42898 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.77■□□□□ 0.6
MTHFRP42898 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
MTHFRP42898 LINC02084-201ENST00000606069 1096 ntBASIC18.77■□□□□ 0.6
MTHFRP42898 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.77■□□□□ 0.6
MTHFRP42898 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTHFRP42898 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MTHFRP42898 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.77■□□□□ 0.59
MTHFRP42898 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MTHFRP42898 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MTHFRP42898 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.59
MTHFRP42898 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MTHFRP42898 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MTHFRP42898 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms