Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.85□□□□□ -0.03
SNCAP37840 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNCAP37840 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 AC004951.3-201ENST00000418645 1148 ntBASIC14.85□□□□□ -0.03
SNCAP37840 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.85□□□□□ -0.03
SNCAP37840 AL353807.1-201ENST00000427475 662 ntBASIC14.85□□□□□ -0.03
SNCAP37840 AC133681.1-201ENST00000465482 601 ntBASIC14.85□□□□□ -0.03
SNCAP37840 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 AL499627.1-201ENST00000569373 2188 ntBASIC14.85□□□□□ -0.03
SNCAP37840 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNCAP37840 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNCAP37840 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.84□□□□□ -0.03
SNCAP37840 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SNCAP37840 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 AC004980.1-204ENST00000429707 299 ntBASIC14.84□□□□□ -0.03
SNCAP37840 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SNCAP37840 RN7SL471P-201ENST00000580476 299 ntBASIC14.84□□□□□ -0.03
SNCAP37840 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.84□□□□□ -0.03
SNCAP37840 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.84□□□□□ -0.03
SNCAP37840 AL357033.4-201ENST00000617703 1807 ntBASIC14.84□□□□□ -0.03
SNCAP37840 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.84□□□□□ -0.03
SNCAP37840 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 AL023806.1-201ENST00000603994 1649 ntBASIC14.84□□□□□ -0.03
SNCAP37840 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.84□□□□□ -0.03
SNCAP37840 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNCAP37840 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.83□□□□□ -0.03
SNCAP37840 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.83□□□□□ -0.03
SNCAP37840 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SNCAP37840 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 ID1-201ENST00000376105 1233 ntBASIC14.83□□□□□ -0.04
SNCAP37840 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.83□□□□□ -0.04
SNCAP37840 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.83□□□□□ -0.04
SNCAP37840 AL353708.3-201ENST00000610272 989 ntBASIC14.83□□□□□ -0.04
SNCAP37840 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.83□□□□□ -0.04
SNCAP37840 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.83□□□□□ -0.04
SNCAP37840 AL031985.4-201ENST00000642138 673 ntBASIC14.83□□□□□ -0.04
SNCAP37840 HTR7P1-201ENST00000538670 1336 ntBASIC14.83□□□□□ -0.04
SNCAP37840 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.83□□□□□ -0.04
SNCAP37840 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNCAP37840 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms