Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMGCLP35914 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCLP35914 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGCLP35914 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HMGCLP35914 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMGCLP35914 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLP35914 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
HMGCLP35914 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCLP35914 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 NOC2LP2-201ENST00000407594 1944 ntBASIC17.91■□□□□ 0.46
HMGCLP35914 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCLP35914 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLP35914 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLP35914 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLP35914 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGCLP35914 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMGCLP35914 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 DRAXINP1-201ENST00000437611 948 ntBASIC17.9■□□□□ 0.46
HMGCLP35914 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.9■□□□□ 0.46
HMGCLP35914 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.9■□□□□ 0.46
HMGCLP35914 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLP35914 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGCLP35914 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLP35914 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCLP35914 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 KRT8P47-201ENST00000604727 1398 ntBASIC17.9■□□□□ 0.46
HMGCLP35914 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLP35914 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
HMGCLP35914 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCLP35914 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.89■□□□□ 0.46
HMGCLP35914 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCLP35914 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HMGCLP35914 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGCLP35914 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCLP35914 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HMGCLP35914 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms