Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DMBP28068 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
HLA-DMBP28068 AC010947.1-201ENST00000623454 693 ntBASIC13.75□□□□□ -0.21
HLA-DMBP28068 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DMBP28068 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DMBP28068 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DMBP28068 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 AC007663.1-201ENST00000438948 1240 ntBASIC13.74□□□□□ -0.21
HLA-DMBP28068 CCR12P-201ENST00000446203 998 ntBASIC13.74□□□□□ -0.21
HLA-DMBP28068 WWOX-216ENST00000569818 525 ntBASIC13.74□□□□□ -0.21
HLA-DMBP28068 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 AC112497.1-201ENST00000624824 639 ntBASIC13.74□□□□□ -0.21
HLA-DMBP28068 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 AL024508.2-201ENST00000607749 1894 ntBASIC13.74□□□□□ -0.21
HLA-DMBP28068 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DMBP28068 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DMBP28068 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 RCN1P1-201ENST00000400413 996 ntBASIC13.73□□□□□ -0.21
HLA-DMBP28068 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 PP12613-201ENST00000424958 2230 ntBASIC13.73□□□□□ -0.21
HLA-DMBP28068 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 AC006116.8-202ENST00000587620 1550 ntBASIC13.73□□□□□ -0.21
HLA-DMBP28068 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.73□□□□□ -0.21
HLA-DMBP28068 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DMBP28068 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DMBP28068 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DMBP28068 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DMBP28068 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DMBP28068 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms