Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.31■□□□□ 0.2
GDF1P27539 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
GDF1P27539 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.31■□□□□ 0.2
GDF1P27539 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.31■□□□□ 0.2
GDF1P27539 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF1P27539 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GDF1P27539 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.3■□□□□ 0.2
GDF1P27539 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF1P27539 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 AC112698.1-201ENST00000510299 916 ntBASIC16.3■□□□□ 0.2
GDF1P27539 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF1P27539 RN7SL510P-201ENST00000581311 263 ntBASIC16.3■□□□□ 0.2
GDF1P27539 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.3■□□□□ 0.2
GDF1P27539 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF1P27539 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF1P27539 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GDF1P27539 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 POM121L3P-201ENST00000419331 1163 ntBASIC16.29■□□□□ 0.2
GDF1P27539 KRT16P4-201ENST00000453883 522 ntBASIC16.29■□□□□ 0.2
GDF1P27539 UNC93B7-201ENST00000509439 705 ntBASIC16.29■□□□□ 0.2
GDF1P27539 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
GDF1P27539 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.29■□□□□ 0.2
GDF1P27539 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.29■□□□□ 0.2
GDF1P27539 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.29■□□□□ 0.2
GDF1P27539 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 AC005336.2-201ENST00000593183 939 ntBASIC16.29■□□□□ 0.2
GDF1P27539 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.29■□□□□ 0.2
GDF1P27539 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF1P27539 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.29■□□□□ 0.2
GDF1P27539 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF1P27539 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
GDF1P27539 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms