Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.52■□□□□ 0.39
LAMA1P25391 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LAMA1P25391 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LAMA1P25391 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.52■□□□□ 0.39
LAMA1P25391 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LAMA1P25391 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LAMA1P25391 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LAMA1P25391 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LAMA1P25391 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.51■□□□□ 0.39
LAMA1P25391 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 MTCL1P1-201ENST00000446207 792 ntBASIC17.51■□□□□ 0.39
LAMA1P25391 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.51■□□□□ 0.39
LAMA1P25391 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.51■□□□□ 0.39
LAMA1P25391 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 AC126763.1-201ENST00000552015 2118 ntBASIC17.51■□□□□ 0.39
LAMA1P25391 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.51■□□□□ 0.39
LAMA1P25391 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.51■□□□□ 0.39
LAMA1P25391 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.51■□□□□ 0.39
LAMA1P25391 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.51■□□□□ 0.39
LAMA1P25391 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LAMA1P25391 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 AC104581.1-202ENST00000635932 2618 ntBASIC17.5■□□□□ 0.39
LAMA1P25391 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.5■□□□□ 0.39
LAMA1P25391 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 AC012645.4-201ENST00000610691 1061 ntBASIC17.5■□□□□ 0.39
LAMA1P25391 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.5■□□□□ 0.39
LAMA1P25391 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 MIR770-201ENST00000390219 98 ntBASIC17.5■□□□□ 0.39
LAMA1P25391 AC108073.2-201ENST00000464002 357 ntBASIC17.5■□□□□ 0.39
LAMA1P25391 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 MIR1199-201ENST00000621445 119 ntBASIC17.5■□□□□ 0.39
LAMA1P25391 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LAMA1P25391 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.5■□□□□ 0.39
LAMA1P25391 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 BCRP1-201ENST00000444246 691 ntBASIC17.49■□□□□ 0.39
LAMA1P25391 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.49■□□□□ 0.39
LAMA1P25391 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.49■□□□□ 0.39
LAMA1P25391 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 MYLKP1-201ENST00000509077 1580 ntBASIC17.49■□□□□ 0.39
LAMA1P25391 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LAMA1P25391 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LAMA1P25391 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.49■□□□□ 0.39
LAMA1P25391 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms