Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP24386 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHMP24386 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP24386 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.85■□□□□ 0.29
CHMP24386 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP24386 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP24386 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.85■□□□□ 0.29
CHMP24386 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.85■□□□□ 0.29
CHMP24386 AC087388.1-201ENST00000571370 1112 ntBASIC16.85■□□□□ 0.29
CHMP24386 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.85■□□□□ 0.29
CHMP24386 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CHMP24386 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CHMP24386 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 HOXB1-202ENST00000577092 1414 ntBASIC16.85■□□□□ 0.29
CHMP24386 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP24386 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHMP24386 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.85■□□□□ 0.29
CHMP24386 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 KRT18P41-201ENST00000518924 1277 ntBASIC16.84■□□□□ 0.29
CHMP24386 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 GCSHP2-201ENST00000560971 527 ntBASIC16.84■□□□□ 0.29
CHMP24386 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 AC112497.1-201ENST00000624824 639 ntBASIC16.84■□□□□ 0.29
CHMP24386 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CHMP24386 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP24386 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 AC012317.2-201ENST00000623305 2251 ntBASIC16.84■□□□□ 0.29
CHMP24386 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP24386 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP24386 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP24386 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 STARP1-201ENST00000397973 869 ntBASIC16.83■□□□□ 0.28
CHMP24386 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP24386 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.83■□□□□ 0.28
CHMP24386 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.83■□□□□ 0.28
CHMP24386 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP24386 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms