Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP11P24347 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MMP11P24347 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 MYLKP1-201ENST00000509077 1580 ntBASIC17.1■□□□□ 0.33
MMP11P24347 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MMP11P24347 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP11P24347 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP11P24347 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP11P24347 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP11P24347 AC026396.1-201ENST00000419388 421 ntBASIC17.09■□□□□ 0.33
MMP11P24347 RN7SL606P-201ENST00000472779 293 ntBASIC17.09■□□□□ 0.33
MMP11P24347 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 AC104819.1-201ENST00000504587 486 ntBASIC17.09■□□□□ 0.33
MMP11P24347 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP11P24347 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 Z69720.1-201ENST00000601483 472 ntBASIC17.09■□□□□ 0.33
MMP11P24347 AL121772.3-201ENST00000610840 674 ntBASIC17.09■□□□□ 0.33
MMP11P24347 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 AC124864.1-201ENST00000623408 392 ntBASIC17.09■□□□□ 0.33
MMP11P24347 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP11P24347 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP11P24347 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP11P24347 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP11P24347 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.08■□□□□ 0.33
MMP11P24347 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP11P24347 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
MMP11P24347 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MMP11P24347 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MMP11P24347 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 AC233702.3-201ENST00000578656 1387 ntBASIC17.08■□□□□ 0.32
MMP11P24347 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP11P24347 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
MMP11P24347 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP11P24347 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP11P24347 RN7SL510P-201ENST00000581311 263 ntBASIC17.08■□□□□ 0.32
MMP11P24347 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP11P24347 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP11P24347 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP11P24347 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP11P24347 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP11P24347 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MMP11P24347 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP11P24347 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP11P24347 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP11P24347 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MMP11P24347 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP11P24347 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP11P24347 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP11P24347 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP11P24347 AC135776.1-201ENST00000319817 2481 ntBASIC17.07■□□□□ 0.32
MMP11P24347 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP11P24347 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP11P24347 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms