Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPN3P20807 AL355312.1-201ENST00000407115 2176 ntBASIC17.35■□□□□ 0.37
CAPN3P20807 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN3P20807 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN3P20807 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 LIN28AP1-201ENST00000429574 405 ntBASIC17.34■□□□□ 0.37
CAPN3P20807 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN3P20807 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN3P20807 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.34■□□□□ 0.37
CAPN3P20807 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN3P20807 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN3P20807 KRT8P9-201ENST00000558927 1449 ntBASIC17.34■□□□□ 0.37
CAPN3P20807 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 HOXB1-202ENST00000577092 1414 ntBASIC17.34■□□□□ 0.37
CAPN3P20807 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CAPN3P20807 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN3P20807 AL023806.1-201ENST00000603994 1649 ntBASIC17.34■□□□□ 0.37
CAPN3P20807 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 DGCR10-201ENST00000609839 495 ntBASIC17.34■□□□□ 0.37
CAPN3P20807 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN3P20807 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN3P20807 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN3P20807 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN3P20807 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN3P20807 AD000864.1-201ENST00000624076 2295 ntBASIC17.33■□□□□ 0.37
CAPN3P20807 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.33■□□□□ 0.37
CAPN3P20807 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.33■□□□□ 0.37
CAPN3P20807 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.33■□□□□ 0.37
CAPN3P20807 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN3P20807 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN3P20807 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN3P20807 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN3P20807 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 AC104076.2-201ENST00000448912 469 ntBASIC17.33■□□□□ 0.36
CAPN3P20807 CA15P1-201ENST00000481698 905 ntBASIC17.33■□□□□ 0.36
CAPN3P20807 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CAPN3P20807 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN3P20807 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
CAPN3P20807 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN3P20807 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN3P20807 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CAPN3P20807 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 AC116562.2-201ENST00000507042 360 ntBASIC17.32■□□□□ 0.36
CAPN3P20807 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN3P20807 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN3P20807 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN3P20807 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CAPN3P20807 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN3P20807 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms