Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
XRCC1P18887 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC1P18887 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC1P18887 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC1P18887 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.97■□□□□ 0.47
XRCC1P18887 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.97■□□□□ 0.47
XRCC1P18887 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC1P18887 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC1P18887 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
XRCC1P18887 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
XRCC1P18887 GNAS-203ENST00000306120 1878 ntBASIC17.97■□□□□ 0.47
XRCC1P18887 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC1P18887 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XRCC1P18887 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.97■□□□□ 0.47
XRCC1P18887 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.96■□□□□ 0.47
XRCC1P18887 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
XRCC1P18887 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.96■□□□□ 0.47
XRCC1P18887 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.96■□□□□ 0.47
XRCC1P18887 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 AC069148.1-201ENST00000608741 768 ntBASIC17.96■□□□□ 0.47
XRCC1P18887 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
XRCC1P18887 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 AC135776.1-201ENST00000319817 2481 ntBASIC17.96■□□□□ 0.47
XRCC1P18887 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.96■□□□□ 0.47
XRCC1P18887 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
XRCC1P18887 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
XRCC1P18887 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XRCC1P18887 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
XRCC1P18887 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.95■□□□□ 0.46
XRCC1P18887 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.95■□□□□ 0.46
XRCC1P18887 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.95■□□□□ 0.46
XRCC1P18887 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.95■□□□□ 0.46
XRCC1P18887 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XRCC1P18887 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
XRCC1P18887 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XRCC1P18887 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XRCC1P18887 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 AL499627.1-201ENST00000569373 2188 ntBASIC17.94■□□□□ 0.46
XRCC1P18887 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
XRCC1P18887 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
XRCC1P18887 AL163051.1-201ENST00000569214 1512 ntBASIC17.94■□□□□ 0.46
XRCC1P18887 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
XRCC1P18887 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
XRCC1P18887 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.94■□□□□ 0.46
XRCC1P18887 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.94■□□□□ 0.46
XRCC1P18887 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.94■□□□□ 0.46
XRCC1P18887 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.94■□□□□ 0.46
XRCC1P18887 AC011498.5-201ENST00000592027 486 ntBASIC17.94■□□□□ 0.46
XRCC1P18887 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
XRCC1P18887 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
XRCC1P18887 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms