Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRAP18433 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PTPRAP18433 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPRAP18433 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 DUTP2-201ENST00000519164 463 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 MTDHP5-201ENST00000598980 586 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 AL589182.2-201ENST00000619332 1049 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.74■□□□□ 0.91
PTPRAP18433 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPRAP18433 AC079781.4-201ENST00000641908 219 ntBASIC20.74■□□□□ 0.91
PTPRAP18433 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPRAP18433 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPRAP18433 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRAP18433 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRAP18433 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PTPRAP18433 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRAP18433 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PTPRAP18433 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PTPRAP18433 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRAP18433 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.73■□□□□ 0.91
PTPRAP18433 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRAP18433 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.73■□□□□ 0.91
PTPRAP18433 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPRAP18433 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPRAP18433 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPRAP18433 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRAP18433 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRAP18433 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
PTPRAP18433 SIRPAP1-201ENST00000448467 1770 ntBASIC20.72■□□□□ 0.91
PTPRAP18433 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPRAP18433 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRAP18433 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRAP18433 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PTPRAP18433 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRAP18433 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPRAP18433 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 AC004706.3-202ENST00000621574 984 ntBASIC20.72■□□□□ 0.91
PTPRAP18433 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPRAP18433 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRAP18433 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPRAP18433 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRAP18433 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPRAP18433 AL353593.2-201ENST00000602529 1483 ntBASIC20.71■□□□□ 0.91
PTPRAP18433 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRAP18433 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTPRAP18433 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPRAP18433 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPRAP18433 AL020989.1-201ENST00000422979 469 ntBASIC20.71■□□□□ 0.91
PTPRAP18433 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPRAP18433 HMGN1P19-201ENST00000436976 333 ntBASIC20.71■□□□□ 0.91
PTPRAP18433 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPRAP18433 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPRAP18433 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPRAP18433 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPRAP18433 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPRAP18433 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPRAP18433 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPRAP18433 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms