Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRKCAP17252 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 AC099343.3-201ENST00000605834 2503 ntBASIC16.7■□□□□ 0.26
PRKCAP17252 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 SDHAP2-201ENST00000455183 2001 ntBASIC16.7■□□□□ 0.26
PRKCAP17252 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
PRKCAP17252 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.7■□□□□ 0.26
PRKCAP17252 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRKCAP17252 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRKCAP17252 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRKCAP17252 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.69■□□□□ 0.26
PRKCAP17252 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.69■□□□□ 0.26
PRKCAP17252 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PRKCAP17252 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PRKCAP17252 TMPOP1-202ENST00000424642 1267 ntBASIC16.69■□□□□ 0.26
PRKCAP17252 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 AC034232.1-201ENST00000506026 1064 ntBASIC16.69■□□□□ 0.26
PRKCAP17252 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PRKCAP17252 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PRKCAP17252 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.69■□□□□ 0.26
PRKCAP17252 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.69■□□□□ 0.26
PRKCAP17252 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.69■□□□□ 0.26
PRKCAP17252 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.69■□□□□ 0.26
PRKCAP17252 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.69■□□□□ 0.26
PRKCAP17252 AL157888.1-201ENST00000631930 593 ntBASIC16.69■□□□□ 0.26
PRKCAP17252 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.69■□□□□ 0.26
PRKCAP17252 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PRKCAP17252 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.69■□□□□ 0.26
PRKCAP17252 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRKCAP17252 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.69■□□□□ 0.26
PRKCAP17252 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.69■□□□□ 0.26
PRKCAP17252 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 AC018695.7-201ENST00000624587 2492 ntBASIC16.68■□□□□ 0.26
PRKCAP17252 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 RNF152P1-201ENST00000397754 604 ntBASIC16.68■□□□□ 0.26
PRKCAP17252 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PRKCAP17252 AK4P3-201ENST00000418260 669 ntBASIC16.68■□□□□ 0.26
PRKCAP17252 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.68■□□□□ 0.26
PRKCAP17252 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.68■□□□□ 0.26
PRKCAP17252 AC104076.2-201ENST00000448912 469 ntBASIC16.68■□□□□ 0.26
PRKCAP17252 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 KRT18P21-201ENST00000515767 1272 ntBASIC16.68■□□□□ 0.26
PRKCAP17252 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.68■□□□□ 0.26
PRKCAP17252 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.68■□□□□ 0.26
PRKCAP17252 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PRKCAP17252 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PRKCAP17252 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.68■□□□□ 0.26
PRKCAP17252 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PRKCAP17252 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRKCAP17252 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PRKCAP17252 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.67■□□□□ 0.26
PRKCAP17252 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PRKCAP17252 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
PRKCAP17252 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKCAP17252 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKCAP17252 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.67■□□□□ 0.26
PRKCAP17252 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKCAP17252 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKCAP17252 TSPY5P-201ENST00000426936 936 ntBASIC16.67■□□□□ 0.26
PRKCAP17252 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms