Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.13■□□□□ 0.97
TOP1P11387 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.13■□□□□ 0.97
TOP1P11387 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TOP1P11387 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TOP1P11387 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOP1P11387 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TOP1P11387 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TOP1P11387 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.12■□□□□ 0.97
TOP1P11387 AC132938.6-201ENST00000623828 1655 ntBASIC21.12■□□□□ 0.97
TOP1P11387 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 AC093010.1-201ENST00000473625 1624 ntBASIC21.12■□□□□ 0.97
TOP1P11387 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
TOP1P11387 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TOP1P11387 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TOP1P11387 IGHV3-47-201ENST00000425060 335 ntBASIC21.12■□□□□ 0.97
TOP1P11387 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TOP1P11387 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.12■□□□□ 0.97
TOP1P11387 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.12■□□□□ 0.97
TOP1P11387 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.12■□□□□ 0.97
TOP1P11387 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.12■□□□□ 0.97
TOP1P11387 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TOP1P11387 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TOP1P11387 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TOP1P11387 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOP1P11387 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.11■□□□□ 0.97
TOP1P11387 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TOP1P11387 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 MTCL1P1-201ENST00000446207 792 ntBASIC21.11■□□□□ 0.97
TOP1P11387 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.11■□□□□ 0.97
TOP1P11387 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.11■□□□□ 0.97
TOP1P11387 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.11■□□□□ 0.97
TOP1P11387 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.11■□□□□ 0.97
TOP1P11387 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOP1P11387 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TOP1P11387 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
TOP1P11387 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TOP1P11387 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.1■□□□□ 0.97
TOP1P11387 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TOP1P11387 AL450487.1-201ENST00000426799 995 ntBASIC21.1■□□□□ 0.97
TOP1P11387 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.1■□□□□ 0.97
TOP1P11387 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.1■□□□□ 0.97
TOP1P11387 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.1■□□□□ 0.97
TOP1P11387 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 BICD1-207ENST00000551848 1962 ntBASIC21.1■□□□□ 0.97
TOP1P11387 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
TOP1P11387 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TOP1P11387 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
TOP1P11387 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TOP1P11387 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
TOP1P11387 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
TOP1P11387 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.09■□□□□ 0.97
TOP1P11387 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.09■□□□□ 0.97
TOP1P11387 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms