Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LAMP1P11279 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
LAMP1P11279 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 AP000523.1-201ENST00000398242 1049 ntBASIC17.07■□□□□ 0.32
LAMP1P11279 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.07■□□□□ 0.32
LAMP1P11279 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.07■□□□□ 0.32
LAMP1P11279 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.07■□□□□ 0.32
LAMP1P11279 GCSHP2-201ENST00000560971 527 ntBASIC17.07■□□□□ 0.32
LAMP1P11279 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.07■□□□□ 0.32
LAMP1P11279 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.07■□□□□ 0.32
LAMP1P11279 LINC00602-201ENST00000629776 2065 ntBASIC17.07■□□□□ 0.32
LAMP1P11279 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.07■□□□□ 0.32
LAMP1P11279 AC020916.1-201ENST00000587762 1774 ntBASIC17.07■□□□□ 0.32
LAMP1P11279 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
LAMP1P11279 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LAMP1P11279 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AL355312.1-201ENST00000407115 2176 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AL645608.8-201ENST00000606034 2086 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
LAMP1P11279 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LAMP1P11279 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AC087499.1-201ENST00000418141 1075 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 AC008687.5-201ENST00000593746 558 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 AC145285.6-201ENST00000604632 637 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.06■□□□□ 0.32
LAMP1P11279 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.06■□□□□ 0.32
LAMP1P11279 AC066615.1-201ENST00000640911 628 ntBASIC17.06■□□□□ 0.32
LAMP1P11279 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LAMP1P11279 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LAMP1P11279 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
LAMP1P11279 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.06■□□□□ 0.32
LAMP1P11279 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LAMP1P11279 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.05■□□□□ 0.32
LAMP1P11279 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LAMP1P11279 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LAMP1P11279 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LAMP1P11279 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms