Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.67■□□□□ 0.58
CD48P09326 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
CD48P09326 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.67■□□□□ 0.58
CD48P09326 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
CD48P09326 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CD48P09326 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.67■□□□□ 0.58
CD48P09326 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD48P09326 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.66■□□□□ 0.58
CD48P09326 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 KRT89P-201ENST00000620027 1478 ntBASIC18.66■□□□□ 0.58
CD48P09326 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.66■□□□□ 0.58
CD48P09326 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.66■□□□□ 0.58
CD48P09326 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.66■□□□□ 0.58
CD48P09326 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.66■□□□□ 0.58
CD48P09326 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD48P09326 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
CD48P09326 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.65■□□□□ 0.58
CD48P09326 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
CD48P09326 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 SPDYE13P-201ENST00000445314 798 ntBASIC18.65■□□□□ 0.58
CD48P09326 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.65■□□□□ 0.58
CD48P09326 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.65■□□□□ 0.58
CD48P09326 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.65■□□□□ 0.58
CD48P09326 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.65■□□□□ 0.58
CD48P09326 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD48P09326 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CD48P09326 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
CD48P09326 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.65■□□□□ 0.58
CD48P09326 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.65■□□□□ 0.58
CD48P09326 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD48P09326 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CD48P09326 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CD48P09326 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD48P09326 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.64■□□□□ 0.57
CD48P09326 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD48P09326 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD48P09326 PP12613-201ENST00000424958 2230 ntBASIC18.64■□□□□ 0.57
CD48P09326 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.64■□□□□ 0.57
CD48P09326 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 KRT18P48-201ENST00000434763 852 ntBASIC18.64■□□□□ 0.57
CD48P09326 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 HOMER2P1-201ENST00000455653 964 ntBASIC18.64■□□□□ 0.57
CD48P09326 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 AC063952.2-201ENST00000498792 1227 ntBASIC18.64■□□□□ 0.57
CD48P09326 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.64■□□□□ 0.57
CD48P09326 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.64■□□□□ 0.57
CD48P09326 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CD48P09326 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD48P09326 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.63■□□□□ 0.57
CD48P09326 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CD48P09326 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms