Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 AC134043.2-201ENST00000624206 2238 ntBASIC17.75■□□□□ 0.43
CAPN1P07384 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CAPN1P07384 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CAPN1P07384 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.74■□□□□ 0.43
CAPN1P07384 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.74■□□□□ 0.43
CAPN1P07384 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 AL136038.3-201ENST00000561909 1096 ntBASIC17.74■□□□□ 0.43
CAPN1P07384 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 IER3-202ENST00000376377 1350 ntBASIC17.74■□□□□ 0.43
CAPN1P07384 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN1P07384 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CAPN1P07384 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN1P07384 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.73■□□□□ 0.43
CAPN1P07384 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 KRT8P7-201ENST00000533003 1432 ntBASIC17.73■□□□□ 0.43
CAPN1P07384 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CAPN1P07384 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 SLC25A6P5-201ENST00000435663 894 ntBASIC17.73■□□□□ 0.43
CAPN1P07384 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CAPN1P07384 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN1P07384 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN1P07384 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.73■□□□□ 0.43
CAPN1P07384 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN1P07384 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN1P07384 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.72■□□□□ 0.43
CAPN1P07384 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
CAPN1P07384 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CAPN1P07384 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 SPDYE13P-201ENST00000445314 798 ntBASIC17.72■□□□□ 0.43
CAPN1P07384 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.72■□□□□ 0.43
CAPN1P07384 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms