Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 AC110285.5-201ENST00000611501 352 ntBASIC20.22■□□□□ 0.83
TPM3P06753 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 AC034236.2-201ENST00000606662 1610 ntBASIC20.22■□□□□ 0.83
TPM3P06753 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM3P06753 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
TPM3P06753 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TPM3P06753 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.22■□□□□ 0.83
TPM3P06753 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM3P06753 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
TPM3P06753 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.21■□□□□ 0.83
TPM3P06753 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 AL353807.1-201ENST00000427475 662 ntBASIC20.21■□□□□ 0.83
TPM3P06753 FAM207BP-201ENST00000447172 505 ntBASIC20.21■□□□□ 0.83
TPM3P06753 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.21■□□□□ 0.83
TPM3P06753 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.21■□□□□ 0.83
TPM3P06753 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 AL031985.4-201ENST00000642138 673 ntBASIC20.21■□□□□ 0.83
TPM3P06753 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TPM3P06753 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.21■□□□□ 0.83
TPM3P06753 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.21■□□□□ 0.83
TPM3P06753 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TPM3P06753 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TPM3P06753 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM3P06753 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
TPM3P06753 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TPM3P06753 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TPM3P06753 KRT16P1-201ENST00000399124 1418 ntBASIC20.2■□□□□ 0.82
TPM3P06753 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 AC046158.3-201ENST00000624947 2558 ntBASIC20.2■□□□□ 0.82
TPM3P06753 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 AC133681.1-201ENST00000465482 601 ntBASIC20.2■□□□□ 0.82
TPM3P06753 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
TPM3P06753 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.2■□□□□ 0.82
TPM3P06753 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM3P06753 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM3P06753 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.2■□□□□ 0.82
TPM3P06753 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPM3P06753 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.2■□□□□ 0.82
TPM3P06753 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TPM3P06753 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.19■□□□□ 0.82
TPM3P06753 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.19■□□□□ 0.82
TPM3P06753 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.19■□□□□ 0.82
TPM3P06753 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.19■□□□□ 0.82
TPM3P06753 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
TPM3P06753 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 AC233263.1-201ENST00000578059 224 ntBASIC20.19■□□□□ 0.82
TPM3P06753 AC104771.1-201ENST00000603335 964 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms