Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 AC011498.5-201ENST00000592027 486 ntBASIC18.27■□□□□ 0.52
HLA-DQB2P05538 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DQB2P05538 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.27■□□□□ 0.51
HLA-DQB2P05538 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DQB2P05538 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 AC012317.2-201ENST00000623305 2251 ntBASIC18.26■□□□□ 0.51
HLA-DQB2P05538 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 KRT8P47-201ENST00000604727 1398 ntBASIC18.26■□□□□ 0.51
HLA-DQB2P05538 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB2P05538 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC134043.2-201ENST00000624206 2238 ntBASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC116407.4-201ENST00000623319 1061 ntBASIC18.25■□□□□ 0.51
HLA-DQB2P05538 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB2P05538 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 PCED1CP-201ENST00000419887 785 ntBASIC18.24■□□□□ 0.51
HLA-DQB2P05538 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB2P05538 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms