Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.57■■□□□ 1.04
COL1A1P02452 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL1A1P02452 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 AL356309.3-201ENST00000624132 1934 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL1A1P02452 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL1A1P02452 PMPCAP1-201ENST00000508114 1576 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.56■■□□□ 1.04
COL1A1P02452 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
COL1A1P02452 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.56■■□□□ 1.04
COL1A1P02452 MED15P5-201ENST00000423150 992 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.56■■□□□ 1.04
COL1A1P02452 AC140113.2-201ENST00000604370 208 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 AC027601.4-201ENST00000611259 610 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 AD001527.2-201ENST00000622994 785 ntBASIC21.56■■□□□ 1.04
COL1A1P02452 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.56■■□□□ 1.04
COL1A1P02452 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL1A1P02452 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.56■■□□□ 1.04
COL1A1P02452 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 AC004408.2-201ENST00000623613 2777 ntBASIC21.55■■□□□ 1.04
COL1A1P02452 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.55■■□□□ 1.04
COL1A1P02452 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.55■■□□□ 1.04
COL1A1P02452 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 AC073592.4-201ENST00000623827 446 ntBASIC21.55■■□□□ 1.04
COL1A1P02452 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL1A1P02452 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL1A1P02452 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL1A1P02452 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.54■■□□□ 1.04
COL1A1P02452 AC009113.1-201ENST00000570267 2443 ntBASIC21.54■■□□□ 1.04
COL1A1P02452 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.54■■□□□ 1.04
COL1A1P02452 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.54■■□□□ 1.04
COL1A1P02452 AC122714.2-201ENST00000502787 707 ntBASIC21.54■■□□□ 1.04
COL1A1P02452 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 AC034105.1-201ENST00000563488 319 ntBASIC21.54■■□□□ 1.04
COL1A1P02452 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.54■■□□□ 1.04
COL1A1P02452 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 NKAPP1-205ENST00000585790 367 ntBASIC21.54■■□□□ 1.04
COL1A1P02452 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 AC079776.2-201ENST00000641154 1609 ntBASIC21.54■■□□□ 1.04
COL1A1P02452 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.54■■□□□ 1.04
COL1A1P02452 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A1P02452 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 AC005104.2-201ENST00000427818 678 ntBASIC21.53■■□□□ 1.04
COL1A1P02452 AC098831.1-202ENST00000438821 336 ntBASIC21.53■■□□□ 1.04
COL1A1P02452 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.53■■□□□ 1.04
COL1A1P02452 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 AC104109.2-201ENST00000602919 1418 ntBASIC21.53■■□□□ 1.04
COL1A1P02452 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.53■■□□□ 1.04
COL1A1P02452 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A1P02452 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.53■■□□□ 1.04
COL1A1P02452 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms