Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRUB2O95900 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.87■□□□□ 0.61
TRUB2O95900 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 BX276092.5-203ENST00000456199 560 ntBASIC18.87■□□□□ 0.61
TRUB2O95900 DUTP2-201ENST00000519164 463 ntBASIC18.87■□□□□ 0.61
TRUB2O95900 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.87■□□□□ 0.61
TRUB2O95900 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.87■□□□□ 0.61
TRUB2O95900 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TRUB2O95900 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 AC134043.2-201ENST00000624206 2238 ntBASIC18.86■□□□□ 0.61
TRUB2O95900 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRUB2O95900 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 AC016734.2-201ENST00000624325 1377 ntBASIC18.86■□□□□ 0.61
TRUB2O95900 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.86■□□□□ 0.61
TRUB2O95900 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 PCDHB18P-201ENST00000524813 2368 ntBASIC18.86■□□□□ 0.61
TRUB2O95900 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRUB2O95900 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.86■□□□□ 0.61
TRUB2O95900 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
TRUB2O95900 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB2O95900 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 KRT18P55-202ENST00000578578 1546 ntBASIC18.85■□□□□ 0.61
TRUB2O95900 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB2O95900 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRUB2O95900 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 UPK3BP1-201ENST00000428678 509 ntBASIC18.85■□□□□ 0.61
TRUB2O95900 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB2O95900 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.85■□□□□ 0.61
TRUB2O95900 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.85■□□□□ 0.61
TRUB2O95900 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB2O95900 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TRUB2O95900 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.84■□□□□ 0.61
TRUB2O95900 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRUB2O95900 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.84■□□□□ 0.61
TRUB2O95900 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB2O95900 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.84■□□□□ 0.61
TRUB2O95900 TSPY12P-201ENST00000421279 868 ntBASIC18.84■□□□□ 0.61
TRUB2O95900 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms