Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 GNAS-203ENST00000306120 1878 ntBASIC16.78■□□□□ 0.28
SOX30O94993 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 AC005521.1-201ENST00000393351 872 ntBASIC16.78■□□□□ 0.28
SOX30O94993 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX30O94993 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX30O94993 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX30O94993 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SOX30O94993 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.77■□□□□ 0.28
SOX30O94993 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX30O94993 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX30O94993 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX30O94993 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX30O94993 AC139887.4-201ENST00000607877 719 ntBASIC16.77■□□□□ 0.28
SOX30O94993 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SOX30O94993 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX30O94993 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX30O94993 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SOX30O94993 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.77■□□□□ 0.27
SOX30O94993 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX30O94993 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX30O94993 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SOX30O94993 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.77■□□□□ 0.27
SOX30O94993 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SOX30O94993 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SOX30O94993 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SOX30O94993 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SOX30O94993 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SOX30O94993 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SOX30O94993 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SOX30O94993 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX30O94993 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX30O94993 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX30O94993 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.76■□□□□ 0.27
SOX30O94993 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX30O94993 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 AC099343.3-201ENST00000605834 2503 ntBASIC16.76■□□□□ 0.27
SOX30O94993 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SOX30O94993 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms