Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC27.89■■■□□ 2.06
PCF11O94913 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.89■■■□□ 2.06
PCF11O94913 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC27.89■■■□□ 2.06
PCF11O94913 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
PCF11O94913 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PCF11O94913 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCF11O94913 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCF11O94913 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
PCF11O94913 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.89■■■□□ 2.06
PCF11O94913 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC27.89■■■□□ 2.05
PCF11O94913 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC27.89■■■□□ 2.05
PCF11O94913 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PCF11O94913 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC27.89■■■□□ 2.05
PCF11O94913 AC007967.2-201ENST00000432613 625 ntBASIC27.89■■■□□ 2.05
PCF11O94913 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.89■■■□□ 2.05
PCF11O94913 AC073592.5-201ENST00000624854 528 ntBASIC27.89■■■□□ 2.05
PCF11O94913 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PCF11O94913 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
PCF11O94913 TNXA-203ENST00000507684 2038 ntBASIC27.89■■■□□ 2.05
PCF11O94913 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCF11O94913 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCF11O94913 AC132938.5-201ENST00000624980 1813 ntBASIC27.88■■■□□ 2.05
PCF11O94913 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC27.88■■■□□ 2.05
PCF11O94913 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC27.88■■■□□ 2.05
PCF11O94913 AL035633.1-201ENST00000406139 838 ntBASIC27.88■■■□□ 2.05
PCF11O94913 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.88■■■□□ 2.05
PCF11O94913 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC27.88■■■□□ 2.05
PCF11O94913 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCF11O94913 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.88■■■□□ 2.05
PCF11O94913 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
PCF11O94913 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.87■■■□□ 2.05
PCF11O94913 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC27.87■■■□□ 2.05
PCF11O94913 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.87■■■□□ 2.05
PCF11O94913 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
PCF11O94913 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.87■■■□□ 2.05
PCF11O94913 AL022326.1-202ENST00000641533 845 ntBASIC27.87■■■□□ 2.05
PCF11O94913 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC27.87■■■□□ 2.05
PCF11O94913 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC27.87■■■□□ 2.05
PCF11O94913 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PCF11O94913 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
PCF11O94913 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PCF11O94913 TBC1D3P5-201ENST00000579401 1545 ntBASIC27.86■■■□□ 2.05
PCF11O94913 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.86■■■□□ 2.05
PCF11O94913 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
PCF11O94913 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 AC105339.3-201ENST00000560043 636 ntBASIC27.86■■■□□ 2.05
PCF11O94913 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 RPS15-207ENST00000591032 550 ntTSL 3 BASIC27.86■■■□□ 2.05
PCF11O94913 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 FAM197Y3-203ENST00000618346 717 ntBASIC27.86■■■□□ 2.05
PCF11O94913 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.86■■■□□ 2.05
PCF11O94913 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC27.86■■■□□ 2.05
PCF11O94913 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 ZNF259P1-201ENST00000407656 1365 ntBASIC27.86■■■□□ 2.05
PCF11O94913 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.86■■■□□ 2.05
PCF11O94913 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 AC009947.1-201ENST00000444350 727 ntBASIC27.86■■■□□ 2.05
PCF11O94913 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 UNC93B6-202ENST00000528242 690 ntBASIC27.86■■■□□ 2.05
PCF11O94913 AC004817.3-201ENST00000602957 2129 ntBASIC27.86■■■□□ 2.05
PCF11O94913 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.86■■■□□ 2.05
PCF11O94913 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCF11O94913 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC27.85■■■□□ 2.05
PCF11O94913 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.85■■■□□ 2.05
PCF11O94913 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC27.85■■■□□ 2.05
PCF11O94913 FUT8-AS1-201ENST00000621019 1521 ntBASIC27.85■■■□□ 2.05
PCF11O94913 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
PCF11O94913 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC27.85■■■□□ 2.05
PCF11O94913 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.85■■■□□ 2.05
PCF11O94913 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC27.85■■■□□ 2.05
PCF11O94913 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms