Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CDKL5O76039 AC134043.2-201ENST00000624206 2238 ntBASIC20.96■□□□□ 0.95
CDKL5O76039 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDKL5O76039 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.95■□□□□ 0.95
CDKL5O76039 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKL5O76039 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDKL5O76039 IGHGP-201ENST00000390555 1178 ntBASIC20.95■□□□□ 0.94
CDKL5O76039 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL5O76039 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL5O76039 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL5O76039 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL5O76039 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKL5O76039 AC004263.2-201ENST00000617183 678 ntBASIC20.95■□□□□ 0.94
CDKL5O76039 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDKL5O76039 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 OR6D1P-202ENST00000641007 5290 ntBASIC20.95■□□□□ 0.94
CDKL5O76039 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDKL5O76039 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL5O76039 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL5O76039 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDKL5O76039 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDKL5O76039 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL5O76039 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKL5O76039 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL5O76039 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL5O76039 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKL5O76039 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKL5O76039 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKL5O76039 AC009154.2-201ENST00000621177 724 ntBASIC20.94■□□□□ 0.94
CDKL5O76039 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL5O76039 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDKL5O76039 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL5O76039 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL5O76039 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL5O76039 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL5O76039 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKL5O76039 TSPY12P-201ENST00000421279 868 ntBASIC20.93■□□□□ 0.94
CDKL5O76039 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.93■□□□□ 0.94
CDKL5O76039 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKL5O76039 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.93■□□□□ 0.94
CDKL5O76039 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL5O76039 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL5O76039 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL5O76039 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL5O76039 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL5O76039 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL5O76039 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL5O76039 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDKL5O76039 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL5O76039 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL5O76039 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL5O76039 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms