Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.87■□□□□ 0.29
CTNSO60931 AC011840.4-201ENST00000578471 627 ntBASIC16.87■□□□□ 0.29
CTNSO60931 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 AL353801.3-201ENST00000609898 542 ntBASIC16.87■□□□□ 0.29
CTNSO60931 NPAP1P7-201ENST00000613027 823 ntBASIC16.87■□□□□ 0.29
CTNSO60931 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTNSO60931 AC093458.2-201ENST00000623150 629 ntBASIC16.87■□□□□ 0.29
CTNSO60931 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTNSO60931 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTNSO60931 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CTNSO60931 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTNSO60931 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CTNSO60931 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNSO60931 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.87■□□□□ 0.29
CTNSO60931 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.86■□□□□ 0.29
CTNSO60931 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.86■□□□□ 0.29
CTNSO60931 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CTNSO60931 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.86■□□□□ 0.29
CTNSO60931 AP002414.4-201ENST00000589764 1148 ntBASIC16.86■□□□□ 0.29
CTNSO60931 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNSO60931 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTNSO60931 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNSO60931 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTNSO60931 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.85■□□□□ 0.29
CTNSO60931 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.85■□□□□ 0.29
CTNSO60931 MIR3180-1-201ENST00000580374 94 ntBASIC16.85■□□□□ 0.29
CTNSO60931 MIR3180-3-201ENST00000584616 94 ntBASIC16.85■□□□□ 0.29
CTNSO60931 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.85■□□□□ 0.29
CTNSO60931 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNSO60931 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CTNSO60931 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNSO60931 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CTNSO60931 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNSO60931 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNSO60931 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms