Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.12■□□□□ 0.49
FOXD2O60548 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXD2O60548 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
FOXD2O60548 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXD2O60548 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXD2O60548 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXD2O60548 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXD2O60548 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FOXD2O60548 IGHV3-22-201ENST00000520721 359 ntBASIC18.11■□□□□ 0.49
FOXD2O60548 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXD2O60548 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXD2O60548 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXD2O60548 AC010327.4-202ENST00000591484 748 ntBASIC18.11■□□□□ 0.49
FOXD2O60548 AL356488.2-201ENST00000602755 427 ntBASIC18.11■□□□□ 0.49
FOXD2O60548 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
FOXD2O60548 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FOXD2O60548 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXD2O60548 TREX1-205ENST00000625293 1783 ntBASIC18.11■□□□□ 0.49
FOXD2O60548 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXD2O60548 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXD2O60548 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXD2O60548 AC139713.2-201ENST00000641328 2723 ntBASIC18.1■□□□□ 0.49
FOXD2O60548 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 AC034236.2-201ENST00000606662 1610 ntBASIC18.1■□□□□ 0.49
FOXD2O60548 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXD2O60548 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FOXD2O60548 AC104109.2-201ENST00000602919 1418 ntBASIC18.1■□□□□ 0.49
FOXD2O60548 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.1■□□□□ 0.49
FOXD2O60548 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXD2O60548 FGFR3P6-201ENST00000457012 610 ntBASIC18.1■□□□□ 0.49
FOXD2O60548 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXD2O60548 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
FOXD2O60548 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FOXD2O60548 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXD2O60548 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXD2O60548 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXD2O60548 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXD2O60548 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
FOXD2O60548 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXD2O60548 AC099398.1-201ENST00000567919 2776 ntBASIC18.09■□□□□ 0.49
FOXD2O60548 HLA-J-201ENST00000462773 1622 ntBASIC18.09■□□□□ 0.49
FOXD2O60548 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FOXD2O60548 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXD2O60548 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXD2O60548 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXD2O60548 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.09■□□□□ 0.49
FOXD2O60548 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXD2O60548 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXD2O60548 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.09■□□□□ 0.49
FOXD2O60548 AC008687.5-201ENST00000593746 558 ntBASIC18.09■□□□□ 0.49
FOXD2O60548 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
FOXD2O60548 AL049840.3-201ENST00000602669 611 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms