Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SSSCA1O60232 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SSSCA1O60232 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.71□□□□□ -0.05
SSSCA1O60232 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SSSCA1O60232 MIR564-202ENST00000385049 94 ntBASIC14.71□□□□□ -0.05
SSSCA1O60232 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.71□□□□□ -0.05
SSSCA1O60232 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.71□□□□□ -0.05
SSSCA1O60232 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SSSCA1O60232 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.71□□□□□ -0.05
SSSCA1O60232 AC091390.4-202ENST00000476426 537 ntBASIC14.71□□□□□ -0.05
SSSCA1O60232 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.71□□□□□ -0.05
SSSCA1O60232 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SSSCA1O60232 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.71□□□□□ -0.05
SSSCA1O60232 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.71□□□□□ -0.05
SSSCA1O60232 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.71□□□□□ -0.05
SSSCA1O60232 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSSCA1O60232 AC018695.7-201ENST00000624587 2492 ntBASIC14.71□□□□□ -0.05
SSSCA1O60232 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSSCA1O60232 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSSCA1O60232 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SSSCA1O60232 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSSCA1O60232 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SSSCA1O60232 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 AC093010.1-201ENST00000473625 1624 ntBASIC14.7□□□□□ -0.06
SSSCA1O60232 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 CROCCP2-202ENST00000412962 2773 ntBASIC14.7□□□□□ -0.06
SSSCA1O60232 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 AC004980.1-204ENST00000429707 299 ntBASIC14.7□□□□□ -0.06
SSSCA1O60232 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 IKBKGP1-201ENST00000612193 1073 ntBASIC14.7□□□□□ -0.06
SSSCA1O60232 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
SSSCA1O60232 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.7□□□□□ -0.06
SSSCA1O60232 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.7□□□□□ -0.06
SSSCA1O60232 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSSCA1O60232 AC034236.2-201ENST00000606662 1610 ntBASIC14.7□□□□□ -0.06
SSSCA1O60232 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SSSCA1O60232 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.69□□□□□ -0.06
SSSCA1O60232 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms