Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CREB3O43889 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
CREB3O43889 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
CREB3O43889 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.79■□□□□ 0.6
CREB3O43889 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.79■□□□□ 0.6
CREB3O43889 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 ZNF444P1-201ENST00000559497 298 ntBASIC18.79■□□□□ 0.6
CREB3O43889 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.79■□□□□ 0.6
CREB3O43889 NTF6B-201ENST00000591913 560 ntBASIC18.79■□□□□ 0.6
CREB3O43889 AC008687.5-201ENST00000593746 558 ntBASIC18.79■□□□□ 0.6
CREB3O43889 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CREB3O43889 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CREB3O43889 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.78■□□□□ 0.6
CREB3O43889 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.78■□□□□ 0.6
CREB3O43889 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 AC093010.1-201ENST00000473625 1624 ntBASIC18.78■□□□□ 0.6
CREB3O43889 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
CREB3O43889 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.78■□□□□ 0.6
CREB3O43889 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.78■□□□□ 0.6
CREB3O43889 KRT18P48-201ENST00000434763 852 ntBASIC18.78■□□□□ 0.6
CREB3O43889 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.78■□□□□ 0.6
CREB3O43889 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.78■□□□□ 0.6
CREB3O43889 AC083849.1-201ENST00000615227 514 ntBASIC18.78■□□□□ 0.6
CREB3O43889 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.78■□□□□ 0.6
CREB3O43889 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.78■□□□□ 0.6
CREB3O43889 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CREB3O43889 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
CREB3O43889 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CREB3O43889 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 LINC00602-201ENST00000629776 2065 ntBASIC18.77■□□□□ 0.6
CREB3O43889 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
CREB3O43889 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.77■□□□□ 0.6
CREB3O43889 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.77■□□□□ 0.6
CREB3O43889 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.77■□□□□ 0.6
CREB3O43889 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.77■□□□□ 0.6
CREB3O43889 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.77■□□□□ 0.6
CREB3O43889 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.77■□□□□ 0.6
CREB3O43889 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.77■□□□□ 0.6
CREB3O43889 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.77■□□□□ 0.6
CREB3O43889 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.77■□□□□ 0.6
CREB3O43889 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CREB3O43889 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.77■□□□□ 0.6
CREB3O43889 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CREB3O43889 AC138028.4-201ENST00000564984 1845 ntBASIC18.77■□□□□ 0.59
CREB3O43889 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
CREB3O43889 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CREB3O43889 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CREB3O43889 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.76■□□□□ 0.59
CREB3O43889 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CREB3O43889 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms