Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD6O43541 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMAD6O43541 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.16■□□□□ 0.5
SMAD6O43541 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 POM121L3P-201ENST00000419331 1163 ntBASIC18.16■□□□□ 0.5
SMAD6O43541 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.16■□□□□ 0.5
SMAD6O43541 KRT16P4-201ENST00000453883 522 ntBASIC18.16■□□□□ 0.5
SMAD6O43541 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.16■□□□□ 0.5
SMAD6O43541 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 MIR5100-201ENST00000579544 119 ntBASIC18.16■□□□□ 0.5
SMAD6O43541 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD6O43541 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SMAD6O43541 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD6O43541 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
SMAD6O43541 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD6O43541 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD6O43541 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.15■□□□□ 0.5
SMAD6O43541 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.15■□□□□ 0.5
SMAD6O43541 AC114341.1-201ENST00000618070 349 ntBASIC18.15■□□□□ 0.5
SMAD6O43541 AL691432.3-201ENST00000621860 400 ntBASIC18.15■□□□□ 0.5
SMAD6O43541 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD6O43541 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMAD6O43541 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.15■□□□□ 0.5
SMAD6O43541 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMAD6O43541 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD6O43541 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.15■□□□□ 0.5
SMAD6O43541 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMAD6O43541 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMAD6O43541 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.14■□□□□ 0.5
SMAD6O43541 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMAD6O43541 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.14■□□□□ 0.5
SMAD6O43541 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.14■□□□□ 0.5
SMAD6O43541 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD6O43541 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD6O43541 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD6O43541 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD6O43541 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 AC022898.2-201ENST00000616822 1312 ntBASIC18.14■□□□□ 0.49
SMAD6O43541 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 NEFHP1-201ENST00000412845 2629 ntBASIC18.14■□□□□ 0.49
SMAD6O43541 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.14■□□□□ 0.49
SMAD6O43541 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMAD6O43541 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD6O43541 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.13■□□□□ 0.49
SMAD6O43541 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.13■□□□□ 0.49
SMAD6O43541 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMAD6O43541 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SMAD6O43541 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.13■□□□□ 0.49
SMAD6O43541 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.13■□□□□ 0.49
SMAD6O43541 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.13■□□□□ 0.49
SMAD6O43541 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD6O43541 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms