Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF9O43307 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF9O43307 AL357033.4-201ENST00000617703 1807 ntBASIC16.73■□□□□ 0.27
ARHGEF9O43307 AC073592.3-201ENST00000625118 1834 ntBASIC16.73■□□□□ 0.27
ARHGEF9O43307 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 MESTP1-201ENST00000404287 994 ntBASIC16.72■□□□□ 0.27
ARHGEF9O43307 AK4P3-201ENST00000418260 669 ntBASIC16.72■□□□□ 0.27
ARHGEF9O43307 UPK3BP1-201ENST00000428678 509 ntBASIC16.72■□□□□ 0.27
ARHGEF9O43307 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 AP005242.2-201ENST00000580065 1175 ntBASIC16.72■□□□□ 0.27
ARHGEF9O43307 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 AP000692.2-201ENST00000608391 879 ntBASIC16.72■□□□□ 0.27
ARHGEF9O43307 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF9O43307 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ARHGEF9O43307 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.71■□□□□ 0.27
ARHGEF9O43307 AC010203.1-204ENST00000548782 407 ntBASIC16.71■□□□□ 0.27
ARHGEF9O43307 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF9O43307 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF9O43307 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF9O43307 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF9O43307 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
ARHGEF9O43307 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF9O43307 AC068587.6-202ENST00000641839 5619 ntBASIC16.71■□□□□ 0.26
ARHGEF9O43307 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
ARHGEF9O43307 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ARHGEF9O43307 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ARHGEF9O43307 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ARHGEF9O43307 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 TSPY14P-201ENST00000303979 915 ntBASIC16.7■□□□□ 0.26
ARHGEF9O43307 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF9O43307 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms