Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.26■□□□□ 0.35
NDUFS4O43181 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 TSPY22P-201ENST00000427496 604 ntBASIC17.26■□□□□ 0.35
NDUFS4O43181 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.26■□□□□ 0.35
NDUFS4O43181 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.26■□□□□ 0.35
NDUFS4O43181 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.26■□□□□ 0.35
NDUFS4O43181 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.26■□□□□ 0.35
NDUFS4O43181 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.26■□□□□ 0.35
NDUFS4O43181 AL358472.4-201ENST00000633140 710 ntBASIC17.26■□□□□ 0.35
NDUFS4O43181 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDUFS4O43181 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFS4O43181 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NDUFS4O43181 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS4O43181 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NDUFS4O43181 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.25■□□□□ 0.35
NDUFS4O43181 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS4O43181 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NDUFS4O43181 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFS4O43181 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.25■□□□□ 0.35
NDUFS4O43181 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFS4O43181 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NDUFS4O43181 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NDUFS4O43181 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NDUFS4O43181 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NDUFS4O43181 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 TSPY12P-201ENST00000421279 868 ntBASIC17.24■□□□□ 0.35
NDUFS4O43181 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.24■□□□□ 0.35
NDUFS4O43181 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.24■□□□□ 0.35
NDUFS4O43181 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.24■□□□□ 0.35
NDUFS4O43181 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.24■□□□□ 0.35
NDUFS4O43181 AC116407.4-201ENST00000623319 1061 ntBASIC17.24■□□□□ 0.35
NDUFS4O43181 AP000550.4-202ENST00000639755 178 ntBASIC17.24■□□□□ 0.35
NDUFS4O43181 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.24■□□□□ 0.35
NDUFS4O43181 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.24■□□□□ 0.35
NDUFS4O43181 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NDUFS4O43181 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NDUFS4O43181 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFS4O43181 AC008764.6-201ENST00000595909 2069 ntBASIC17.24■□□□□ 0.35
NDUFS4O43181 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms