Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDX4O14627 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.26■□□□□ 0.35
CDX4O14627 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX4O14627 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDX4O14627 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDX4O14627 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX4O14627 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDX4O14627 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX4O14627 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDX4O14627 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.25■□□□□ 0.35
CDX4O14627 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.25■□□□□ 0.35
CDX4O14627 ACTG1P14-201ENST00000446382 1122 ntBASIC17.25■□□□□ 0.35
CDX4O14627 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.25■□□□□ 0.35
CDX4O14627 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX4O14627 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX4O14627 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX4O14627 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.25■□□□□ 0.35
CDX4O14627 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.25■□□□□ 0.35
CDX4O14627 AC004449.1-201ENST00000564240 433 ntBASIC17.25■□□□□ 0.35
CDX4O14627 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 AC138761.1-201ENST00000584393 385 ntBASIC17.25■□□□□ 0.35
CDX4O14627 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.25■□□□□ 0.35
CDX4O14627 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDX4O14627 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.25■□□□□ 0.35
CDX4O14627 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDX4O14627 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 NCF1C-201ENST00000438382 1427 ntBASIC17.24■□□□□ 0.35
CDX4O14627 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 AC093484.2-201ENST00000580996 2166 ntBASIC17.24■□□□□ 0.35
CDX4O14627 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX4O14627 AC092474.2-201ENST00000424288 719 ntBASIC17.24■□□□□ 0.35
CDX4O14627 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.24■□□□□ 0.35
CDX4O14627 FAM58CP-201ENST00000435741 640 ntBASIC17.24■□□□□ 0.35
CDX4O14627 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX4O14627 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 PAWRP1-201ENST00000451083 565 ntBASIC17.24■□□□□ 0.35
CDX4O14627 KRT19P2-202ENST00000557173 1012 ntBASIC17.24■□□□□ 0.35
CDX4O14627 AC096734.2-201ENST00000562054 433 ntBASIC17.24■□□□□ 0.35
CDX4O14627 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.24■□□□□ 0.35
CDX4O14627 AC010507.1-201ENST00000633895 436 ntBASIC17.24■□□□□ 0.35
CDX4O14627 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CDX4O14627 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.24■□□□□ 0.35
CDX4O14627 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX4O14627 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDX4O14627 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
CDX4O14627 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 BCAR1-209ENST00000546196 1340 ntBASIC17.23■□□□□ 0.35
CDX4O14627 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms