Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.69■□□□□ 0.42
CDC7O00311 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC7O00311 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.69■□□□□ 0.42
CDC7O00311 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC7O00311 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC7O00311 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC7O00311 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CDC7O00311 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDC7O00311 AC024563.2-201ENST00000603282 481 ntBASIC17.68■□□□□ 0.42
CDC7O00311 AL136038.4-201ENST00000603606 1261 ntBASIC17.68■□□□□ 0.42
CDC7O00311 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC7O00311 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC7O00311 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC7O00311 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CDC7O00311 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC7O00311 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDC7O00311 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
CDC7O00311 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CDC7O00311 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 AC092597.1-201ENST00000487352 616 ntBASIC17.67■□□□□ 0.42
CDC7O00311 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.67■□□□□ 0.42
CDC7O00311 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.67■□□□□ 0.42
CDC7O00311 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.67■□□□□ 0.42
CDC7O00311 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC7O00311 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.67■□□□□ 0.42
CDC7O00311 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC7O00311 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC7O00311 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDC7O00311 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC7O00311 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC7O00311 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDC7O00311 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC7O00311 STARP1-201ENST00000397973 869 ntBASIC17.66■□□□□ 0.42
CDC7O00311 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.66■□□□□ 0.42
CDC7O00311 AC113404.2-201ENST00000507884 177 ntBASIC17.66■□□□□ 0.42
CDC7O00311 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC7O00311 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.66■□□□□ 0.42
CDC7O00311 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms