Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.63■□□□□ 0.41
EIF3FO00303 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EIF3FO00303 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EIF3FO00303 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 VENTXP5-201ENST00000523979 775 ntBASIC17.62■□□□□ 0.41
EIF3FO00303 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
EIF3FO00303 AL390719.2-201ENST00000606993 987 ntBASIC17.62■□□□□ 0.41
EIF3FO00303 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EIF3FO00303 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EIF3FO00303 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EIF3FO00303 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
EIF3FO00303 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 AL353692.3-201ENST00000407031 1396 ntBASIC17.62■□□□□ 0.41
EIF3FO00303 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
EIF3FO00303 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EIF3FO00303 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.61■□□□□ 0.41
EIF3FO00303 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.61■□□□□ 0.41
EIF3FO00303 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
EIF3FO00303 SPDYE13P-201ENST00000445314 798 ntBASIC17.61■□□□□ 0.41
EIF3FO00303 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.61■□□□□ 0.41
EIF3FO00303 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.61■□□□□ 0.41
EIF3FO00303 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.61■□□□□ 0.41
EIF3FO00303 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.61■□□□□ 0.41
EIF3FO00303 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.61■□□□□ 0.41
EIF3FO00303 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.61■□□□□ 0.41
EIF3FO00303 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.61■□□□□ 0.41
EIF3FO00303 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.61■□□□□ 0.41
EIF3FO00303 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EIF3FO00303 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.6■□□□□ 0.41
EIF3FO00303 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
EIF3FO00303 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EIF3FO00303 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
EIF3FO00303 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EIF3FO00303 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.6■□□□□ 0.41
EIF3FO00303 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EIF3FO00303 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms