Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 AC100803.2-201ENST00000562459 1963 ntBASIC16.99■□□□□ 0.31
CLIC1O00299 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 MIR718-201ENST00000390190 70 ntBASIC16.99■□□□□ 0.31
CLIC1O00299 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.99■□□□□ 0.31
CLIC1O00299 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.99■□□□□ 0.31
CLIC1O00299 AC008550.1-201ENST00000511500 884 ntBASIC16.99■□□□□ 0.31
CLIC1O00299 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CLIC1O00299 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CLIC1O00299 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC1O00299 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC1O00299 AC106820.2-201ENST00000563775 3264 ntBASIC16.99■□□□□ 0.31
CLIC1O00299 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC1O00299 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.98■□□□□ 0.31
CLIC1O00299 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 TSPY14P-201ENST00000303979 915 ntBASIC16.98■□□□□ 0.31
CLIC1O00299 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.98■□□□□ 0.31
CLIC1O00299 SEC1P-202ENST00000473944 940 ntBASIC16.98■□□□□ 0.31
CLIC1O00299 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.98■□□□□ 0.31
CLIC1O00299 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLIC1O00299 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLIC1O00299 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLIC1O00299 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIC1O00299 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.97■□□□□ 0.31
CLIC1O00299 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.97■□□□□ 0.31
CLIC1O00299 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLIC1O00299 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CLIC1O00299 AC080080.1-201ENST00000625121 2420 ntBASIC16.97■□□□□ 0.31
CLIC1O00299 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 AL023806.1-201ENST00000603994 1649 ntBASIC16.97■□□□□ 0.31
CLIC1O00299 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLIC1O00299 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms