Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VGLL3A8MV65 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VGLL3A8MV65 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 OR7E47P-201ENST00000546390 1422 ntBASIC17.66■□□□□ 0.42
VGLL3A8MV65 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 MIR572-201ENST00000384983 95 ntBASIC17.66■□□□□ 0.42
VGLL3A8MV65 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 AL031602.1-201ENST00000633169 911 ntBASIC17.66■□□□□ 0.42
VGLL3A8MV65 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.66■□□□□ 0.42
VGLL3A8MV65 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.66■□□□□ 0.42
VGLL3A8MV65 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VGLL3A8MV65 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VGLL3A8MV65 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VGLL3A8MV65 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VGLL3A8MV65 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VGLL3A8MV65 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VGLL3A8MV65 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
VGLL3A8MV65 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VGLL3A8MV65 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VGLL3A8MV65 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.64■□□□□ 0.41
VGLL3A8MV65 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms