Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 AC022211.2-201ENST00000585075 2527 ntBASIC12.83□□□□□ -0.36
LINC01549A6NIU2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01549A6NIU2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 MST1L-201ENST00000442552 2185 ntBASIC12.82□□□□□ -0.36
LINC01549A6NIU2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01549A6NIU2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PCDH8P1-201ENST00000428983 2773 ntBASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PP12613-201ENST00000424958 2230 ntBASIC12.81□□□□□ -0.36
LINC01549A6NIU2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 HLA-B-256ENST00000639848 1089 ntBASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01549A6NIU2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01549A6NIU2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms