Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GOLGA6L4A6NEF3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 AL645608.8-201ENST00000606034 2086 ntBASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GOLGA6L4A6NEF3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 FAM201B-201ENST00000458407 597 ntBASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GOLGA6L4A6NEF3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 MIR4674-201ENST00000582457 87 ntBASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GOLGA6L4A6NEF3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 AP001412.1-201ENST00000608405 714 ntBASIC20.78■□□□□ 0.92
GOLGA6L4A6NEF3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms